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Conserved Domain Database

Database of annotations of functional units in proteins including multiple sequence alignment models for ancient domains and full-length proteins. This collection of models includes 3D structures that display the sequence/structure/function relationships in proteins. It also includes alignments of the domains to known three-dimensional protein structures in the MMDB database. The source databases are Pfam, Smart, and COG. Users can identify amino acids in protein sequences with the resources available as well as view single sequences embedded within multiple sequence alignments.

URL: http://www.ncbi.nlm.nih.gov/cdd

Resource ID: nif-0000-02647     Resource Type: Resource     Version: Latest Version

Keywords

protein, amino acid sequence, nucleic acid, 3d structure, annotation, function, sequence, structure, amino acid, gold standard

Comment

Access: open
Reuse: Open- http://www.ncbi.nlm.nih.gov/Structure/cdd/docs/cdd_publications.html
Start date: NA
Type: governmental/disciplinary
Deposit: NA
(info provided by re3data.org)

Additional Resource Types

database

Alternate URLs

http://www.ncbi.nlm.nih.gov/sites/entrez?db=cdd

Resource PubMed IDs

PMID: 20808945, PMID: 21187898, PMID: 21368862, PMID: 21498883, PMID: 21607549, PMID: 21745372, PMID: 21765907, PMID: 21931773, PMID: 22375954, PMID: 22474409, PMID: 22568606, PMID: 22937087, PMID: 23133313, PMID: 23249212, PMID: 23275879, PMID: 23516563, PMID: 23548000, PMID: 23621884, PMID: 23630449, PMID: 23665909, PMID: 23738841, PMID: 24155949, PMID: 24223817, PMID: 24434517, PMID: 24497728, PMID: 24587055, PMID: 24616560, PMID: 24722667, PMID: 24740254, PMID: 24784152, PMID: 24920959, PMID: 24982879, PMID: 25110882, PMID: 25133543, PMID: 25189468, PMID: 25269088, PMID: 25299656, PMID: 25314222, PMID: 25352857, PMID: 25418599, PMID: 25503521, PMID: 25515027

Related To

Resource:Pfam, Resource:SMART, Resource:COG

Abbreviation

CDD

Parent Organization

Resource Status

Last checked up;

Synonyms

Conserved Domains Database, Conserved Domains

Curation Status

curated

Listed By

re3data.org

Supercategory

Resource

Original Submitter

Anonymous

Version Status

Curated

Submitted On

12:00am September 20, 2010

Originated From

SciCrunch

Changes from Previous Version

First Version

Version 1

Created 4 years ago by Anonymous