X
Forgot Password

If you have forgotten your password you can enter your email here and get a temporary password sent to your email.

SMD

Database to store, annotate, view, analyze and share microarray data. It provides registered users access to their own data, provides users access to public data, and tools with which to analyze those data, to any public user anywhere in the world. The GenePattern software package has been incorporated directly into SMD, providing access to many new analysis tools, as well as a plug-in architecture that allows users to directly integrate and share additional tools through SMD. This extension is available with the SMD source code that is fully and freely available to others under an Open Source license, enabling other groups to create a local installation of SMD with an enriched data analysis capability. SMD search options allow the user to Search By Experiments, Search By Datasets, or Search By Gene Names. Web services are provided using common standards, such as Simple Object Access Protocol (SOAP). This enables both local and remote researchers to connect to an installation of the database and retrieve data using pre-defined methods, without needing to resort to use of a web browser.

URL: http://smd.princeton.edu/

Resource ID: nlx_94141     Resource Type: Resource     Version: Latest Version

Keywords

data set, microarray, gene, image, gene expression, adenovirus disease, apoptosis, leukemia, source code, web service

Curation Status

curated

Listed By

3DVC, re3data.org, OMICtools

Old URLs

http://genome-www.stanford.edu/microarray/, http://smd.stanford.edu/

Supercategory

Resource

Abbreviation

SMD

Synonyms

Stanford Microarray Database

Parent Organization

Resource PubMed IDs

PMID: 12930545, PMID: 15186489, PMID: 16151515, PMID: 20098702, PMID: 20585577, PMID: 22163293, PMID: 24895587, PMID: 24992939

Resource Status

Last checked up;

Comment

org-id: smd_stanford Access: Open/Closed
Start date: 2011
Type: Disciplinary
(info provided by re3data.org)

Additional Resource Types

database, data repository, data analysis service

Availability

Public, Open-source license, The community can contribute to this resource, Acknowledgement requested

Alternate IDs

OMICS_00870

Original Submitter

Anonymous

Version Status

Curated

Submitted On

12:00am July 19, 2011

Originated From

SciCrunch

Changes from Previous Version

First Version

Version 1

Created 4 years ago by Anonymous