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pTARGET

pTARGET is a computational method to predict the subcellular localization of only eukaryotic proteins from animal species that include fungi and metazoans. Predictions are carried out based on the occurrence patterns of protein functional domains and the amino acid compositional differences in proteins from different subcellular locations. This method can predict proteins targeted to nine distinct subcellular locations that include cytoplasm, endoplasmic reticulum, extracellular/secreted, Golgi, lysosomes, mitochondria, nucleus, peroxysomes and plasma membrane. Current predictions are based on Pfam database version 19.0. Datasets used for developing pTarget method are available.

URL: http://golgi.unmc.edu/ptarget/

Resource ID: nlx_18589     Resource Type: Resource     Version: Latest Version

Abbreviation

pTARGET

Old URLs

http://bioapps.rit.albany.edu/pTARGET/

Resource PubMed IDs

PMID: 19754976, PMID: 20033263

Synonyms

pTARGET: Prediction server for protein subcellular localization

Curation Status

uncurated

Parent Organization

Additional Resource Types

data analysis service, data set

Supercategory

Resource

Resource Status

Last checked up;

Original Submitter

Anonymous

Version Status

Curated

Submitted On

12:00am July 15, 2011

Originated From

SciCrunch

Changes from Previous Version

First Version

Version 1

Created 4 years ago by Anonymous